Last updated on 2025-09-01 23:49:42 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.34 | 254.56 | 267.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.74 | 227.00 | 236.74 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.05 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.57 | 261.65 | 275.22 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 254.59 | 269.60 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 182.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 185.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 235.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.086, elapsed: 1.996 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.016, system: 0.195, elapsed: 13.089 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.802, system: 0.207, elapsed: 6.481 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.007, elapsed: 0.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.346, system: 0.542, elapsed: 23.264 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.050, elapsed: 2.548 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.095, system: 0.103, elapsed: 15.532 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.736, system: 0.151, elapsed: 5.734 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.287, system: 0.339, elapsed: 25.204 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.035, elapsed: 2.093 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.054, system: 0.047, elapsed: 13.883 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.010, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.761, system: 0.177, elapsed: 6.381 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.260 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.181, system: 0.222, elapsed: 1.177 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.532, system: 0.512, elapsed: 25.118 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.447, system: 0.028, elapsed: 2.384 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.965, system: 0.074, elapsed: 14.763 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.729, system: 0.173, elapsed: 5.618 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.239 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.216, system: 0.446, elapsed: 17.077 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.378, system: 0.766, elapsed: 41.430 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/123s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.040, elapsed: 2.243 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.939, system: 0.083, elapsed: 13.541 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.015, elapsed: 0.381 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.628, system: 0.196, elapsed: 6.016 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.978, system: 0.359, elapsed: 23.264 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.618, system: 0.043, elapsed: 2.829 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.080, system: 0.099, elapsed: 15.487 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.590, system: 0.165, elapsed: 5.235 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.220 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.183, system: 0.355, elapsed: 25.143 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.030, elapsed: 2.126 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.867, system: 0.058, elapsed: 13.512 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.548, system: 0.156, elapsed: 6.082 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.013, elapsed: 0.301 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.071, system: 0.253, elapsed: 1.172 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.983, system: 0.545, elapsed: 24.528 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.032, elapsed: 2.775 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.114, system: 0.164, elapsed: 14.934 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.612, system: 0.213, elapsed: 6.814 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.318 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.137, system: 0.501, elapsed: 16.011 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.394, system: 0.958, elapsed: 42.257 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64