99bdafd62dbe302a605021332bb335a7 *DESCRIPTION
1d8bf6b367ad09bcb3141b6333215149 *NAMESPACE
02e9cdfe50667de107236be3b49798b1 *NEWS
d4da15d7034e1710c5659be1d8566850 *R/PeakErrorSamples.R
345c47fbfa0d80eb40cfd0180347ca8a *R/PeakSegJoint.R
bb97dd3478f4a86df69353d7effce5d1 *R/PeakSegJointError.R
d7367988657ca29610361cf68ab2d532 *R/PoissonLoss.R
5d70c6f0026fa5b918375459ad4954fc *R/binSum.R
422623c39deb62c9096ff2986994c693 *R/clusterPeaks.R
c903c1ca2218489d7bab4fe006d71f6f *R/features.R
f3805f034b8cedfdaae33c80c103edc6 *R/multiClusterPeaks.R
b002f1979e35d061b57cc2cc0b14d53e *data/H3K27ac.TDH.MMM4.RData
f2b427b40549be87edaa3858fc1ce917 *data/H3K36me3.AM.immune.chunk21.RData
4f6cc61618f17908081449150f6a67f9 *data/H3K36me3.TDH.other.chunk1.RData
e4d3e43fdd280f1793ba84894e8ca6f9 *data/H3K4me3.PGP.immune.chunk2.RData
2ab0805c0fd38660cc70f862d97a412f *data/H3K4me3.TDH.other.chunk8.RData
0a72957dee8d17d1210904fa9d6e60fd *data/chr7.peaks.RData
6795f191ae1cdee8f8467b000e34282b *data/demo.profiles.RData
d51f5038df997cc5c55e5bf33d6e1f9a *data/overflow.list.RData
657da13badcdfb8762752aa0dd7c8a36 *data/peak.at.profile.end.RData
ee3cff368e7e71ff5d8a2d56f56b93e6 *data/peak1.infeasible.RData
81da6724c2ec057fd5a66d41c996078b *man/ConvertModelList.Rd
883f2edd1708f0cf4ea873d112b8a014 *man/GeomTallRect.Rd
374ceb5f7a51af923d8f022509c3d7cc *man/H3K27ac.TDH.MMM4.Rd
89a3e655df4e0809adf6309cfd1293bb *man/H3K36me3.AM.immune.chunk21.Rd
2162ad7905667c3d6245f66b2336ec37 *man/H3K36me3.TDH.other.chunk1.Rd
3e89504646400ce49c839fabe0be5ee2 *man/H3K4me3.PGP.immune.chunk2.Rd
be95d49046346689db30d3b194ee24ba *man/H3K4me3.TDH.other.chunk8.Rd
af7488d06f0938598df0bf9e7ce20915 *man/PeakErrorSamples.Rd
d7156d2f3706cba9689efbe27f166b22 *man/PeakSegJointError.Rd
c29682d59f24782af5dbcb919b1426a0 *man/PeakSegJointFaster.Rd
ba99ca9cfe8f5385117ddf5246144a2f *man/PeakSegJointFasterOne.Rd
fde28b5b04c3560cf0f9eab59e497dfa *man/PeakSegJointHeuristic.Rd
66d62baf08384722486fa7bdcf41d951 *man/PeakSegJointHeuristicStep1.Rd
bee2660b66be48661e364cfaa2b59717 *man/PeakSegJointHeuristicStep2.Rd
6c45f7a7f928f2a2aa4a275ec5e10800 *man/PeakSegJointSeveral.Rd
98440c0faafc74ba1e0b10aa6b50d7db *man/PoissonLoss.Rd
b0c411563b91218882a6636bc9f6b48c *man/ProfileList.Rd
09440262767753f6b98022cbe02244e5 *man/binSum.Rd
0d42542ad1f14233c20c9abd8774a431 *man/chr7.peaks.Rd
abe4abf71afe1d20a3aac72ad8cdfc4a *man/clusterPeaks.Rd
536e6ef91eb4a342b62b0b1271872164 *man/demo.profiles.Rd
7a876789324d7780f680b49fabefbf13 *man/featureMatrixJoint.Rd
eaeb0a706cb84a79771d3cb046743329 *man/multiClusterPeaks.Rd
df1f27e2e33285b8f16ad4eb856cf4ce *man/overflow.list.Rd
99d549577f47485fe2f16235934ac1f7 *man/peak.at.profile.end.Rd
1aca63b37efd09fcccf58567ca8da39c *man/peak1.infeasible.Rd
06ccdf933a2bb09a9e4f3cef78d8cb49 *src/OptimalPoissonLoss.c
b57436e1e18fd1f5c83327e153537b8b *src/OptimalPoissonLoss.h
476ee64e6c4fe009adb0e01af7627aa0 *src/PeakSegJoint.c
f7e2f4d02e0fb6e8a2a42bcff1cde64b *src/PeakSegJoint.h
3410fe30fa33edc15ac1b7c947b49217 *src/PeakSegJointFaster.c
60c4f66025b8dadfa36f042290c6e5eb *src/PeakSegJointFaster.h
9d19ab0f2168717864e176603f1e3c3c *src/PeakSegJoint_interface.c
0eeec58e81126d597eee2830609c378c *src/binSum.c
3eb7c8a8c1d43ccee637f21a3f9fa545 *src/binSum.h
afdf97a9f8ed5441c7b387eab12854d2 *src/clusterPeaks.c
8def9336fd0a6c027be2ee002e297daf *src/clusterPeaks.h
ba76dd373fa40fcf93eb7f8a6ccdb5e0 *src/multiClusterPeaks.c
4eed6b2467659a8218c5331a48f832a6 *src/multiClusterPeaks.h
9135a8b3c1691aca346427d74aa9e37d *src/profile.c
f2e1fadfacd924f207b8001c94b72fef *src/profile.h
1fa657dfdbdc189d75a152e2765d8151 *tests/testthat.R
53b26a34a149a5d356c0bbc5ada8db68 *tests/testthat/test-CRAN-binSum.R
ed926200707b9daa99fc16de1f0813e7 *tests/testthat/test-CRAN-converted.R
27dde88dd59a30d5b1c97cfe41b7dd1f *tests/testthat/test-CRAN-features.R
abfefa45d90bf3bf23dce066d86deea4 *tests/testthat/test-CRAN-likelihood.R
da4607916eb98e0e7d8d763d44ca6b03 *tests/testthat/test-CRAN-trivial.R
6db0bc616c00e749a2a20ac57a8aeca4 *tests/testthat/test-CRAN.R
