7749f6f615edfd71200d62f405b644fe *DESCRIPTION
7d507821892d6a2f19975e6690a7613c *NAMESPACE
f791fc5a5ac6c81cf8121ffbd216b4bd *NEWS.md
e868e058180404835dcc8ad906790e08 *R/RcppExports.R
8feff5a78f9caf6f23c27aba62869a30 *R/TDApplied-package.R
11a8ff54b0f5ffce485123d7c8bcec7f *R/analyze_representatives.R
ebcab1ccd1bf830dd3b7936f46197537 *R/bootstrap.R
e4c18414ee44d1a68e01d3080a37a411 *R/convert.R
2c7f41838c63f67e381fd2d94d8fb0f4 *R/distance_calculations.R
1010c65e54561edf634ae27e036d1487 *R/enclosing_rad.R
974ff303e71a60fb636c8ac8366a666f *R/inference.R
e1ff8c507a2e3bb4f543646c9945a4ec *R/kernel_calculations.R
fa08ebd8f2bee0f668ff46093b3bce76 *R/machine_learning.R
21b65d194ee37e9b36f49cec62af5210 *R/plot.R
08b846518365051334b4530927dfb4c5 *R/python_functions.R
12f3bdb3ce67f8957949216d0f610c69 *R/rips_complexes.R
6d7eaf1b7f330d4248e42d0e2920c3d8 *R/utilities.R
139727d03d5ff2c09578f27d648ddc36 *R/zzz.R
9233c2f07bfd8f3a1207c01ff2e381de *README.md
902a8129b24f8e9916fd0d6c384c8024 *build/partial.rdb
03d1d31ba446f5e7be1bda3c1912400c *build/vignette.rds
43cf6b3c6292b51a2ff41a882a321e11 *exec/TDApplied_HCP.R
ccbbe80f0cd17e88a85a69f2d22a35eb *exec/benchmarking_and_vignette_figures.R
1aa3161217cb32e45699d822df31eb09 *exec/parallel_with_approximation.R
cb659d0ac27495b0dead7e1a7ca179ea *inst/doc/HCP_analysis.R
7339e691daeb48c3310fc8ed1a8b94f3 *inst/doc/HCP_analysis.Rmd
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7bf617509608b0ae812c95136a91f446 *inst/doc/ML_and_Inference.html
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4ae1ac2094113962bcad746d6a3b07d6 *inst/doc/comparing_calcs.R
4690f1dcac9ad20710efd861ff3b4d4f *inst/doc/comparing_calcs.Rmd
2ab410ded109401bb2597fe7b357cc72 *inst/doc/comparing_calcs.html
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7be9e50ae4d8bc666045f4544abd8cef *inst/doc/personalized_analyses.html
57eb202e10c76500c09156b322e3fab6 *man/PyH.Rd
7e0b9604dafb4eef002b606520f1f2ac *man/TDApplied-package.Rd
8a4c9fe1ebb785848e077a3d90bbf1c4 *man/analyze_representatives.Rd
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6759c2dba57b02925080e6bf4b200b96 *man/check_PyH_setup.Rd
84d5d9ec7ec27c2fc424c6d5b6a2e2eb *man/check_ripser.Rd
1386fa3b81bad6bd3d6b86e766dfc983 *man/diagram_distance.Rd
5b73a04cee6a311fbedd0e3b32613b8c *man/diagram_kernel.Rd
84e5a14969b921bf26a6a6c76d2ed5ec *man/diagram_kkmeans.Rd
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56628274b7bd1f3d95ebf99b9b7d5eb2 *man/diagram_mds.Rd
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350e1c7239f1a06dee83dde4ce6ac6a7 *man/plot_vr_graph.Rd
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ac78a456084a995f17464bfee3d78049 *man/predict_diagram_kpca.Rd
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43fea16dac906b3dea464f3f073c91a7 *man/universal_null.Rd
520d6a75d57e4a7718dd2ddff962ef22 *man/vr_graphs.Rd
d11c97c7fd6d7350207966ef20dad158 *src/ANN.cpp
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7d46f4f41d3d086a38ab91e72d82e526 *src/Makevars.win
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fd172c9bf8fa4596e3d9aec596f15dfa *src/bd_tree.cpp
908b622900dac205e785ec1b1f9bcafe *src/bd_tree.h
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4fe59be693d39078495fa95bb6f6cbbf *src/figtree.cpp
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7dbe014f987d087f114b1b5878be3da5 *src/figtree_internal.h
286fe5ea62f6a408b2a7904a32ae8ac9 *src/kd_dump.cpp
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6a2b7b82ae832d05b1d9f3f28ca8edec *src/kd_fix_rad_search.h
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221f9d9ddb58ca79d57872489069a908 *src/kd_pr_search.h
302ba64d06fe79dbf19389eebecaa48b *src/kd_search.cpp
2575a185e352c3b670303c7df2bec891 *src/kd_search.h
0b11ba38b64f9f96f2b756dd393313ba *src/kd_split.cpp
e8a4b953f0a1cb7ebf956292c40f47eb *src/kd_split.h
5c276c15a7f399c64fd225f6f418bc9d *src/kd_tree.cpp
5f3790573167d04fe4d954bde22f65bd *src/kd_tree.h
5b0b9230e93d645e7c321cd373c02eed *src/kd_util.cpp
c6c69141418482d4b64bf1f30ab52853 *src/kd_util.h
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fd36889a5ab990a5d9c9bbd3dfd18a0f *src/perf.cpp
bc318d848d623dc1002c4ae0211d1ef7 *src/pr_queue.h
5442c976dc89a58e66cf085b10f27119 *src/pr_queue_k.h
7b1861b65cc62a92b2cd137489997a0b *tests/testthat.R
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7339e691daeb48c3310fc8ed1a8b94f3 *vignettes/HCP_analysis.Rmd
90241576b3528b44ce0ccad053b800d0 *vignettes/ML_and_Inference.Rmd
136f1d1e248feba141a7ae5f0df9828f *vignettes/REFERENCES.bib
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0fcd97c91f93c0530e63aafeb7e66b19 *vignettes/cols.rds
75042963e80d94f3ca4b5fa250cad833 *vignettes/cols_respiratory.rds
4290625982ccd7f4c6a8c25d10552ce3 *vignettes/cols_time_since_last_block.rds
4690f1dcac9ad20710efd861ff3b4d4f *vignettes/comparing_calcs.Rmd
0fa44de49a526514472f495bbdde3c0a *vignettes/emb.rds
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289132f8942d3babe7509490ae0894ac *vignettes/rips_secondary.rds
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8c3c75bb9e128d504664c1bcf1fa05cd *vignettes/thresh.rds
