Package: shinyExprPortal
Title: A Configurable 'shiny' Portal for Sharing Analysis of Molecular
        Expression Data
Version: 1.2.1
Authors@R: person('Rafael', 'Henkin', email = 'r.henkin@qmul.ac.uk', role = c('cre', 'aut', 'cph'), comment = c(ORCID = '0000-0002-5511-5230'))
Maintainer: Rafael Henkin <r.henkin@qmul.ac.uk>
Description: Enables deploying configuration file-based 'shiny' apps with minimal programming for interactive exploration and analysis showcase of molecular expression data. For exploration, supports visualization of correlations between rows of an expression matrix and a table of observations, such as clinical measures, and comparison of changes in expression over time. For showcase, enables visualizing the results of differential expression from package such as 'limma', co-expression modules from 'WGCNA' and lower dimensional projections.
Depends: R (>= 3.5.0)
License: MIT + file LICENSE
biocViews:
Imports: config, stats, utils, shiny, htmltools, markdown, cli, dplyr,
        tidyr, yaml, data.table, bslib, iheatmapr, vegawidget, DT,
        qvalue, parallel, Rfast, rlang, shinyhelper
Encoding: UTF-8
RoxygenNote: 7.3.2
Suggests: testthat (>= 3.0.0), whisker, knitr, rmarkdown, r2d3,
        kableExtra, RColorBrewer
VignetteBuilder: knitr
URL: https://c4tb.github.io/shinyExprPortal/,
        https://github.com/C4TB/shinyExprPortal
Config/testthat/edition: 3
BugReports: https://github.com/C4TB/shinyExprPortal/issues
NeedsCompilation: no
Packaged: 2024-07-29 12:54:52 UTC; rafaelhenkin
Author: Rafael Henkin [cre, aut, cph] (<https://orcid.org/0000-0002-5511-5230>)
Repository: CRAN
Date/Publication: 2024-07-29 15:10:02 UTC
Built: R 4.3.3; ; 2025-04-07 03:14:44 UTC; windows
