Package: seAMLess
Type: Package
Title: A Single Cell Transcriptomics Based Deconvolution Pipeline for
        Leukemia
Description: Given a bulk transcriptomic (RNA-seq) sample of an Myeloid Leukemia patient calculates immune composition and drug resistance for different small-molecule inhibitors. Published in <https://www.nature.com/articles/s41698-024-00596-9>.
Version: 0.1.1
Authors@R: 
    c(person(given = "E Onur",
             family = "Karakaslar",
             role = c("aut", "cre"),
             email = "eonurkara@gmail.com"
            ),
    person(given = "Redmar van den Berg",
            role = c("ctb")
            )
     )
biocViews:
Depends: R (>= 3.5.0)
Imports: Biobase, ggplot2, optparse, data.table,
Suggests: MuSiC, ggtern, seAMLessData, randomForest
Additional_repositories: https://eonurk.github.io/drat/
URL: https://github.com/eonurk/seAMLess
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
NeedsCompilation: no
Packaged: 2024-11-11 10:18:00 UTC; onur-lumc
Author: E Onur Karakaslar [aut, cre],
  Redmar van den Berg [ctb]
Maintainer: E Onur Karakaslar <eonurkara@gmail.com>
Repository: CRAN
Date/Publication: 2024-11-11 12:50:02 UTC
Built: R 4.3.3; ; 2025-04-07 02:32:07 UTC; windows
