# Generated by roxygen2: do not edit by hand

export(.block_sum)
export(.block_sum2)
export(.compute_F3fromF2)
export(.compute_F3fromF2samples)
export(.compute_F4DfromF2samples)
export(.compute_F4fromF2)
export(.compute_F4fromF2samples)
export(.compute_H1)
export(.compute_Q2)
export(.compute_QmatfromF2samples)
export(.compute_blockDdenom)
export(.compute_snpFstAov)
export(.compute_snpHierFstAov)
export(.compute_snpQ1)
export(.compute_snpQ1onepop)
export(.compute_snpQ1rw)
export(.compute_snpQ2)
export(.compute_snpQ2onepair)
export(.compute_snpQ2rw)
export(.extract_allele_names)
export(.extract_nonvscan_counts)
export(.extract_vscan_counts)
export(.find_indelneighbor_idx)
export(.generateF3names)
export(.generateF4names)
export(.scan_allele_info)
export(.simureads_mono)
export(.simureads_poly)
export(add.leaf)
export(compare.fitted.fstats)
export(compute.f4ratio)
export(compute.fstats)
export(compute.pairwiseFST)
export(computeFST)
export(countdata.subset)
export(countdata2genobaypass)
export(find.tree.popset)
export(fit.graph)
export(generate.graph.params)
export(generate.jackknife.blocks)
export(genobaypass2countdata)
export(genobaypass2pooldata)
export(genoselestim2pooldata)
export(genotreemix2countdata)
export(graph.builder)
export(graph.params2qpGraphFiles)
export(graph.params2symbolic.fstats)
export(is.countdata)
export(is.fitted.graph)
export(is.fstats)
export(is.graph.params)
export(is.pairwisefst)
export(is.pooldata)
export(make.example.files)
export(plot_fstats)
export(pooldata.subset)
export(pooldata2diyabc)
export(pooldata2genobaypass)
export(pooldata2genoselestim)
export(popsync2pooldata)
export(randomallele.pca)
export(rooted.njtree.builder)
export(sim.readcounts)
export(sliding.windows.fstat)
export(vcf2pooldata)
exportClasses(countdata)
exportClasses(fitted.graph)
exportClasses(fstats)
exportClasses(graph.params)
exportClasses(pairwisefst)
exportClasses(pooldata)
exportMethods(heatmap)
exportMethods(plot)
import(RcppProgress)
import(graphics)
importFrom(DiagrammeR,grViz)
importFrom(Matrix,rankMatrix)
importFrom(Rcpp,evalCpp)
importFrom(Ryacas,yac)
importFrom(ape,dist.nodes)
importFrom(ape,nj)
importFrom(data.table,fread)
importFrom(data.table,fwrite)
importFrom(doParallel,registerDoParallel)
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(foreach,getDoParWorkers)
importFrom(graphics,abline)
importFrom(graphics,arrows)
importFrom(graphics,par)
importFrom(graphics,text)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,show)
importFrom(methods,validObject)
importFrom(nnls,nnls)
importFrom(parallel,detectCores)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(progress,progress_bar)
importFrom(stats,as.dist)
importFrom(stats,cov)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,heatmap)
importFrom(stats,optim)
importFrom(stats,qnorm)
importFrom(stats,quantile)
importFrom(stats,reorder)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(utils,combn)
importFrom(utils,read.table)
importFrom(utils,write.table)
useDynLib(poolfstat)
