Package: gprofiler2
Type: Package
Title: Interface to the 'g:Profiler' Toolset
Version: 0.2.3
Author: Liis Kolberg <liis.kolberg@ut.ee>, Uku Raudvere <uku.raudvere@ut.ee>
Maintainer: Liis Kolberg <liis.kolberg@ut.ee>
Description: A toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via 'g:Profiler' (<https://biit.cs.ut.ee/gprofiler/>). 
    The main tools are: 
    (1) 'g:GOSt' - functional enrichment analysis and visualization of gene lists; 
    (2) 'g:Convert' - gene/protein/transcript identifier conversion across various namespaces;
    (3) 'g:Orth' - orthology search across species;
    (4) 'g:SNPense' - mapping SNP rs identifiers to chromosome positions, genes and variant effects.
    This package is an R interface corresponding to the 2019 update of 'g:Profiler' and provides access to 'g:Profiler' for versions 'e94_eg41_p11' and higher. See the package 'gProfileR' for accessing older versions from the 'g:Profiler' toolset.  
BugReports: https://biit.cs.ut.ee/gprofiler/page/contact
License: GPL (>= 2)
Encoding: UTF-8
RoxygenNote: 7.1.1
Imports: jsonlite, RCurl, ggplot2, plotly, tidyr (>= 1.0.0), crosstalk,
        grDevices, gridExtra, grid, viridisLite, dplyr
Depends: R (>= 3.5)
Suggests: knitr, rmarkdown, prettydoc
VignetteBuilder: knitr, rmarkdown
NeedsCompilation: no
Packaged: 2024-02-23 20:09:31 UTC; Liis
Repository: CRAN
Date/Publication: 2024-02-23 21:50:02 UTC
Built: R 4.3.3; ; 2025-04-07 03:00:18 UTC; windows
