Ready-to-Use Omics Formatting, Analysis, and Visualization Pipeline

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Documentation for package ‘readyomics’ version 0.1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

add_feat_name	Append feature names to a 'dana' object
add_taxa	Add taxonomic information to 'dana' object
adjust_pval	Adjust P-values in a 'dana' object
build_phyloseq	Build phyloseq objects for all taxonomy ranks
dana	Differential analysis (dana)
mva	Multivariate analysis (PCA, PLS, OPLS)
permanova	PERMANOVA with flexible permutation control
process_ms	Process MS-like omics data
process_ngs	Process next generation sequencing data
ready_plots	Generate plots from a differential analysis ('dana') object